Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847798.1_cds_XP_016510189.1_23053
CDS Infomation

[gene=LOC107827549] [db_xref=GeneID:107827549] [protein=respiratory burst oxidase homolog protein D-like isoform X2] [protein_id=XP_016510189.1] [location=complement(join(28044..28131,29764..29834,29953..30055,30531..30646,30752..30847,31110..31493,32559..32987,33066..33179,33616..33664,33781..33943,34836..35346))] [gbkey=CDS]
Sequence

ATGAAAATGCAAAAAACCGAAGACCACAATTCTGACAGGGATATTATCGAGAATATTGAT
AATAGTACTCAGTCGAACGCCATCACATATACTGATGACACGTACGTTGAAATCACCCTC
GATGTCCGGGAGGACACCGTGGCAGTCCACAGTGTCAAAAATGCCAGTGGGGCTAATGTA
GAGGAAGCAGAGCTACAGGTGCTGAGGCTGGCCAAAAATCTACGGAAGAAACAATCTTTT
GGGACCTCAGTCGTTAGGAATACTTCGATAAGGATGCGGCAGGTGGCTCAAGAGCTTAAG
CGCTTGGCTACATTGAAGAAACAACAGCCACATCCTTCTCGGCGATTTGATCGGACCAAT
TCAGTAGCAGCTCATCATGCTCTCAAAGGCCTCAAATTTATCAGCAAAACTGATGGCGGC
GCTGGATGGGCCGCCGTTGAGAAGCGCTTCCACGAGCTCAGTGCCACCTCAGATGGCTTG
CTTCCTCGGGCAAAATTTGGAGAATGCATAGGTATGAATAGGGAATCAAAGGAATTTGCA
GTAGAGCTTTTTGATGCGTTAGCTCGGAGGAGAAATATAACACGTAATTGCATCAGCAAA
GTACAGCTCAAAGAGTTTTGGGACCAAATTGCCAATCAATGTTTTGATGCTCGGCTTCGA
ACCTTCTTTGACATGGTTGATAAAAATGCAGATGGTAGAATCTCAGAAGAAGAAGTCAAA
GAGATTATTAGTCTTAGTGCATCTGCTAATAAGCTGTCAAATATCCAGAAACAAGCTGAT
GAATACGCAGCATTAATAATGGAAGAGTTAGACCCCGACAACTTGGGATACATTATGATT
GAGAACTTGGAAATGCTTTTATTACAAACTCCAAATCAATCAGAAGGAGGAAAAGGCCTG
AACAGGAACCTAAGTCATATGCTAAGTTTGAAGCTTAAGCCAACAGTGGAGCCTAATCCC
ATAAAAAGATGGTATAAGAATTTGAACTACTTTTTGCTGGATAATTGGCAGAGAATTTGG
GTGGTTTTATTGTGGATTGGAGCAATGGTTGGCTTATTTGCTTATAAGTATGTACAGTAC
AGAAACAGAGCAGCATTTTATGTAATGGGTCACTGTGTTTGTATGGCAAAAGGGGCTGCT
GAGATACTTAAGCTCAATATGGCATTGATTTTACTACCAGTCTGCAGAAATACTATCACC
TGGCTTCGAAACAAGACCAAATTAGCTGCTGCTGTTCCCTTTGATGATAACCTTAACTTT
CACAAAATGATGGCAGTGGCAATTGCAATTGGTGTTGGAATACACATACTTGCTCACATG
ACTTGTGATTTTCCAAGGCTACTAAAGGCTAGCCCAGAAAAGTATAAACCAATGGAGCCA
TACTTTGGTTATCAGCCAACAAGCTATTGGCATTTTGTGAAGGGAGTTGAAGGGTTGAGT
GGGATTCTAATGGTGGTTTTGATGGCAATTGCTTTCACTCTAGCAACTCCATGGTTTAGA
AGGAATAGAATTAAATTACCAAGACCCTTGAACAAACTCACTGGATTCAATGCTTTCTGG
TACTCCCACCACCTCTTTGTCATTGTCTACACTCTCCTTATTGTCCATGGTATCAAGCTT
TACTTGACCAAAGAATGGTACATGAAAACGACATGGATGTACTTGGCTATACCAATCATA
TTATATTCTGGTGAAAGATTACTTAGGGCATTCAGGTCAAGCATCAAGGATGTTAAAATT
TTGAAAGTGGCTGTGTATCCTGGAAATGTGTTGGCACTTCATATGTCAAAACCACAGGGC
TTCAAATATAAAAGTGGGCAGTACATGTTTGTCAACTGTGCTGCTGTTTCACCATTTGAA
TGGCACCCATTTTCTATTACTTCGGCGCCGGGGGATAACTATGTCAGTATCCATATTCGA
ACTCTTGGTGATTGGACCAGCAAGCTCAGAGCTGTTTTCTCAGAGGTGTGCCAACCATTG
CCAACTGGGAAAAGCGGACACCTAGTAGCTGAGTGCTTGCAAGGAGAGAACAAAAAGGGT
TTTCTACTGTGGGGCACCAGCACTGACGAAAGAGCTAAGACAGCTAGCCTTGGATTTTTC
CCGCAAGACATCTACAAAGTTTGA

Peptide Sequence

PEP ID

XP_016510189.1
PEP Infomation

PREDICTED: respiratory burst oxidase homolog protein D-like isoform X2 [Nicotiana tabacum]
Sequence

MKMQKTEDHNSDRDIIENIDNSTQSNAITYTDDTYVEITLDVREDTVAVHSVKNASGANV
EEAELQVLRLAKNLRKKQSFGTSVVRNTSIRMRQVAQELKRLATLKKQQPHPSRRFDRTN
SVAAHHALKGLKFISKTDGGAGWAAVEKRFHELSATSDGLLPRAKFGECIGMNRESKEFA
VELFDALARRRNITRNCISKVQLKEFWDQIANQCFDARLRTFFDMVDKNADGRISEEEVK
EIISLSASANKLSNIQKQADEYAALIMEELDPDNLGYIMIENLEMLLLQTPNQSEGGKGL
NRNLSHMLSLKLKPTVEPNPIKRWYKNLNYFLLDNWQRIWVVLLWIGAMVGLFAYKYVQY
RNRAAFYVMGHCVCMAKGAAEILKLNMALILLPVCRNTITWLRNKTKLAAAVPFDDNLNF
HKMMAVAIAIGVGIHILAHMTCDFPRLLKASPEKYKPMEPYFGYQPTSYWHFVKGVEGLS
GILMVVLMAIAFTLATPWFRRNRIKLPRPLNKLTGFNAFWYSHHLFVIVYTLLIVHGIKL
YLTKEWYMKTTWMYLAIPIILYSGERLLRAFRSSIKDVKILKVAVYPGNVLALHMSKPQG
FKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDNYVSIHIRTLGDWTSKLRAVFSEVCQPL
PTGKSGHLVAECLQGENKKGFLLWGTSTDERAKTASLGFFPQDIYKV

Transcript Sequence

Gene sequence data has not been registered.